Publications (Showing 3 of 3)

Phylogenomics and the rise of the angiosperms

Nature
2024

Vol. 629, Issue 8013

pp. 843-850

Angiosperms are the cornerstone of most terrestrial ecosystems and human livelihoods1,2. A robust understanding of angiosperm evolution is required to explain their rise to ecological dominance. So far, the angiosperm tree of life has been determined primarily by means of analyses of the plastid genome3,4. Many studies have drawn on this foundational work, such as classification and first insights into angiosperm diversification since their Mesozoic origins5–7. However, the limited and biased sampling of both taxa and genomes undermines confidence in the tree and its implications. Here, we build the tree of life for almost 8,000 (about 60%) angiosperm genera using a standardized set of 353 nuclear genes8. This 15-fold increase in genus-level sampling relative to comparable nuclear studies9 provides a critical test of earlier results and brings notable change to key groups, especially in rosids, while substantiating many previously predicted relationships. Scaling this tree to time using 200 fossils, we discovered that early angiosperm evolution was characterized by high gene tree conflict and explosive diversification, giving rise to more than 80% of extant angiosperm orders. Steady diversification ensued through the remaining Mesozoic Era until rates resurged in the Cenozoic Era, concurrent with decreasing global temperatures and tightly linked with gene tree conflict. Taken together, our extensive sampling combined with advanced phylogenomic methods shows the deep history and full complexity in the evolution of a megadiverse clade.

DOI:

10.1038/s41586-024-07324-0

View Publication

New Guinea has the world’s richest island flora

Nature
2020

Vol. 584, Issue 7822

pp. 579-583

New Guinea is the world’s largest tropical island and has fascinated naturalists for centuries. Home to some of the best-preserved ecosystems on the planet and to intact ecological gradients—from mangroves to tropical alpine grasslands—that are unmatched in the Asia-Pacific region, it is a globally recognized centre of biological and cultural diversity. So far, however, there has been no attempt to critically catalogue the entire vascular plant diversity of New Guinea. Here we present the first, to our knowledge, expert-verified checklist of the vascular plants of mainland New Guinea and surrounding islands. Our publicly available checklist includes 13,634 species (68% endemic), 1,742 genera and 264 families—suggesting that New Guinea is the most floristically diverse island in the world. Expert knowledge is essential for building checklists in the digital era: reliance on online taxonomic resources alone would have inflated species counts by 22%. Species discovery shows no sign of levelling off, and we discuss steps to accelerate botanical research in the ‘Last Unknown’.

DOI:

10.1038/s41586-020-2549-5

View Publication

Pleurostylia serrulata and two allied new species from Africa are actually members of the New World Crossopetalum (Celastraceae)

Systematic Botany
2016

Vol. 41, Issue 4

pp. 851-864

Based on phylogenetic analyses using rDNA and plastid sequence data, and the examination of morphological characters, we infer that Pleurostylia, as currently delimited, is a polyphyletic group. Pleurostylia serrulata and two newly described species from Africa are part of the New World Crossopetalum lineage. By contrast, Pleurostylia s. s. consists of all remaining species, which form a clade nested within a primarily Malagasy lineage. We present preliminary evidence that Pleurostylia opposita, the most geographically widespread species in the entire Celastraceae family, may include cryptic species. Although molecular evidence supports the monophyly of Crossopetalum, this genus does not appear to be well defined by a single morphological synapomorphy, rather the following combination of character states is diagnostic: 4-merous flowers; stamens inserted in the sinuses of a ± 4-lobed intrastaminal floral disk; pistil (2- or) 4-locular with one atropous ovule per locule; stigma conspicuously (2-) 4-branched; drupe usually single seeded and asymmetric with an excentric style remnant; and seeds exarillate with ramified postchalazal bundles visible on the surface and with endosperm present. A taxonomic treatment of Crossopetalum in Africa is presented, in which the new combination Crossopetalum serrulatum is proposed and two new species, C. bokdamii and C. mossambicense, are described and their conservation status assessed.

DOI:

10.1600/036364416x693955

View Publication
Iain Darbyshire | Flora of the World